Corticicoccus populi gen. nov., sp. nov., a member of the family Staphylococcaceae, isolated from symptomatic bark of Populus × euramericana canker.
Identifieur interne : 001452 ( Main/Exploration ); précédent : 001451; suivant : 001453Corticicoccus populi gen. nov., sp. nov., a member of the family Staphylococcaceae, isolated from symptomatic bark of Populus × euramericana canker.
Auteurs : Yong Li [République populaire de Chine] ; Sheng-Kun Wang [République populaire de Chine] ; Han Xue [République populaire de Chine] ; Ju-Pu Chang [République populaire de Chine] ; Li-Min Guo [République populaire de Chine] ; Xu-Qi Yang [République populaire de Chine]Source :
- International journal of systematic and evolutionary microbiology [ 1466-5034 ] ; 2017.
Descripteurs français
- KwdFr :
- ADN bactérien (génétique), ARN ribosomique 16S (génétique), Acides gras (composition chimique), Analyse de séquence d'ADN (MeSH), Chine (MeSH), Composition en bases nucléiques (MeSH), Glycolipides (composition chimique), Maladies des plantes (microbiologie), Paroi cellulaire (composition chimique), Peptidoglycane (composition chimique), Phospholipides (composition chimique), Phylogenèse (MeSH), Populus (microbiologie), Staphylococcaceae (classification), Staphylococcaceae (génétique), Staphylococcaceae (isolement et purification), Techniques de typage bactérien (MeSH), Vitamine K2 (analogues et dérivés), Vitamine K2 (composition chimique), Écorce (microbiologie).
- MESH :
- analogues et dérivés : Vitamine K2.
- composition chimique : Acides gras, Glycolipides, Paroi cellulaire, Peptidoglycane, Phospholipides, Staphylococcaceae, Vitamine K2.
- génétique : ADN bactérien, ARN ribosomique 16S, Staphylococcaceae.
- isolement et purification : Staphylococcaceae.
- microbiologie : Maladies des plantes, Populus, Écorce.
- Analyse de séquence d'ADN, Chine, Composition en bases nucléiques, Phylogenèse, Techniques de typage bactérien.
English descriptors
- KwdEn :
- Bacterial Typing Techniques (MeSH), Base Composition (MeSH), Cell Wall (chemistry), China (MeSH), DNA, Bacterial (genetics), Fatty Acids (chemistry), Glycolipids (chemistry), Peptidoglycan (chemistry), Phospholipids (chemistry), Phylogeny (MeSH), Plant Bark (microbiology), Plant Diseases (microbiology), Populus (microbiology), RNA, Ribosomal, 16S (genetics), Sequence Analysis, DNA (MeSH), Staphylococcaceae (classification), Staphylococcaceae (genetics), Staphylococcaceae (isolation & purification), Vitamin K 2 (analogs & derivatives), Vitamin K 2 (chemistry).
- MESH :
- chemical , analogs & derivatives : Vitamin K 2.
- chemical , chemistry : Fatty Acids, Glycolipids, Peptidoglycan, Phospholipids, Vitamin K 2.
- chemical , genetics : DNA, Bacterial, RNA, Ribosomal, 16S.
- chemistry : Cell Wall.
- classification : Staphylococcaceae.
- genetics : Staphylococcaceae.
- isolation & purification : Staphylococcaceae.
- microbiology : Plant Bark, Plant Diseases, Populus.
- Bacterial Typing Techniques, Base Composition, China, Phylogeny, Sequence Analysis, DNA.
Abstract
Two Gram-stain-positive, aerobic, non-motile, bacterial strains were isolated from symptomatic bark tissue of Populus × euramericana canker. The isolates were able to grow between 10 and 37 °C, at pH 6-10 and with 0-4 % (w/v) NaCl, with optimal growth at 28-30 °C, pH 7.0-8.0 and with 2 % (w/v) NaCl The strains were found to be oxidase and catalase positive. The menaquinone of strain 26D10-3-4T was MK-7 and the peptidoglycan type A3α based on l-Lys-Gly3-?Ala. The polar lipid profiles of strain 26D10-3-4T showed diphosphatidylglycerol, phosphatidylglycerol, two unidentified phospholipids and three unidentified glycolipids, and the major fatty acids found were anteiso-C15 : 0, iso-C15 : 0, iso-C17 : 0 and anteiso-C17 : 0. The DNA G+C content was 38.2 mol%. The two novel isolates shared the highest 16S rRNA gene sequence similarity with Salinicoccus qingdaonensis ZXM223T (95.0 %). Based on phenotypic and genotypic characteristics, these two strains represent a novel species of a new genus of the family Staphylococcaceae; the name Corticicoccus populi gen. nov., sp. nov. is proposed. The type strain of the type species is 26D10-3-4T (=CFCC 12725T=KCTC 33575T). An additional strain of the species is 9-4-1.
DOI: 10.1099/ijsem.0.001602
PubMed: 27902236
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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Forest Ecology Environment and Protection, Chinese Academy of Forestry, Beijing 100091, PR China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>The Key Laboratory of State Forestry Administration on Forest Protection, Research Institute of Forest Ecology Environment and Protection, Chinese Academy of Forestry, Beijing 100091</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation></author><author><name sortKey="Chang, Ju Pu" sort="Chang, Ju Pu" uniqKey="Chang J" first="Ju-Pu" last="Chang">Ju-Pu Chang</name><affiliation wicri:level="1"><nlm:affiliation>Puyang Academy of Forestry, Puyang 457000, PR China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Puyang Academy of Forestry, Puyang 457000</wicri:regionArea><wicri:noRegion>Puyang 457000</wicri:noRegion></affiliation></author><author><name sortKey="Guo, Li Min" sort="Guo, Li Min" uniqKey="Guo L" first="Li-Min" last="Guo">Li-Min Guo</name><affiliation wicri:level="1"><nlm:affiliation>Puyang Academy of Forestry, Puyang 457000, PR China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Puyang Academy of Forestry, Puyang 457000</wicri:regionArea><wicri:noRegion>Puyang 457000</wicri:noRegion></affiliation></author><author><name sortKey="Yang, Xu Qi" sort="Yang, Xu Qi" uniqKey="Yang X" first="Xu-Qi" last="Yang">Xu-Qi Yang</name><affiliation wicri:level="1"><nlm:affiliation>Puyang Academy of Forestry, Puyang 457000, PR China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Puyang Academy of Forestry, Puyang 457000</wicri:regionArea><wicri:noRegion>Puyang 457000</wicri:noRegion></affiliation></author></analytic><series><title level="j">International journal of systematic and evolutionary microbiology</title><idno type="eISSN">1466-5034</idno><imprint><date when="2017" type="published">2017</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Bacterial Typing Techniques (MeSH)</term><term>Base Composition (MeSH)</term><term>Cell Wall (chemistry)</term><term>China (MeSH)</term><term>DNA, Bacterial (genetics)</term><term>Fatty Acids (chemistry)</term><term>Glycolipids (chemistry)</term><term>Peptidoglycan (chemistry)</term><term>Phospholipids (chemistry)</term><term>Phylogeny (MeSH)</term><term>Plant Bark (microbiology)</term><term>Plant Diseases (microbiology)</term><term>Populus (microbiology)</term><term>RNA, Ribosomal, 16S (genetics)</term><term>Sequence Analysis, DNA (MeSH)</term><term>Staphylococcaceae (classification)</term><term>Staphylococcaceae (genetics)</term><term>Staphylococcaceae (isolation & purification)</term><term>Vitamin K 2 (analogs & derivatives)</term><term>Vitamin K 2 (chemistry)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>ADN bactérien (génétique)</term><term>ARN ribosomique 16S (génétique)</term><term>Acides gras (composition chimique)</term><term>Analyse de séquence d'ADN (MeSH)</term><term>Chine (MeSH)</term><term>Composition en bases nucléiques (MeSH)</term><term>Glycolipides (composition chimique)</term><term>Maladies des plantes (microbiologie)</term><term>Paroi cellulaire (composition chimique)</term><term>Peptidoglycane (composition chimique)</term><term>Phospholipides (composition chimique)</term><term>Phylogenèse (MeSH)</term><term>Populus (microbiologie)</term><term>Staphylococcaceae (classification)</term><term>Staphylococcaceae (génétique)</term><term>Staphylococcaceae (isolement et purification)</term><term>Techniques de typage bactérien (MeSH)</term><term>Vitamine K2 (analogues et dérivés)</term><term>Vitamine K2 (composition chimique)</term><term>Écorce (microbiologie)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="analogs & derivatives" xml:lang="en"><term>Vitamin K 2</term></keywords><keywords scheme="MESH" type="chemical" qualifier="chemistry" xml:lang="en"><term>Fatty Acids</term><term>Glycolipids</term><term>Peptidoglycan</term><term>Phospholipids</term><term>Vitamin K 2</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>DNA, Bacterial</term><term>RNA, Ribosomal, 16S</term></keywords><keywords scheme="MESH" qualifier="analogues et dérivés" xml:lang="fr"><term>Vitamine K2</term></keywords><keywords scheme="MESH" qualifier="chemistry" xml:lang="en"><term>Cell Wall</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Staphylococcaceae</term></keywords><keywords scheme="MESH" qualifier="composition chimique" xml:lang="fr"><term>Acides gras</term><term>Glycolipides</term><term>Paroi cellulaire</term><term>Peptidoglycane</term><term>Phospholipides</term><term>Staphylococcaceae</term><term>Vitamine K2</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Staphylococcaceae</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>ADN bactérien</term><term>ARN ribosomique 16S</term><term>Staphylococcaceae</term></keywords><keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Staphylococcaceae</term></keywords><keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>Staphylococcaceae</term></keywords><keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Maladies des plantes</term><term>Populus</term><term>Écorce</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Plant Bark</term><term>Plant Diseases</term><term>Populus</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Bacterial Typing Techniques</term><term>Base Composition</term><term>China</term><term>Phylogeny</term><term>Sequence Analysis, DNA</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Analyse de séquence d'ADN</term><term>Chine</term><term>Composition en bases nucléiques</term><term>Phylogenèse</term><term>Techniques de typage bactérien</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Two Gram-stain-positive, aerobic, non-motile, bacterial strains were isolated from symptomatic bark tissue of Populus × euramericana canker. The isolates were able to grow between 10 and 37 °C, at pH 6-10 and with 0-4 % (w/v) NaCl, with optimal growth at 28-30 °C, pH 7.0-8.0 and with 2 % (w/v) NaCl The strains were found to be oxidase and catalase positive. The menaquinone of strain 26D10-3-4T was MK-7 and the peptidoglycan type A3α based on l-Lys-Gly3-?Ala. The polar lipid profiles of strain 26D10-3-4T showed diphosphatidylglycerol, phosphatidylglycerol, two unidentified phospholipids and three unidentified glycolipids, and the major fatty acids found were anteiso-C15 : 0, iso-C15 : 0, iso-C17 : 0 and anteiso-C17 : 0. The DNA G+C content was 38.2 mol%. The two novel isolates shared the highest 16S rRNA gene sequence similarity with Salinicoccus qingdaonensis ZXM223T (95.0 %). Based on phenotypic and genotypic characteristics, these two strains represent a novel species of a new genus of the family Staphylococcaceae; the name Corticicoccus populi gen. nov., sp. nov. is proposed. The type strain of the type species is 26D10-3-4T (=CFCC 12725T=KCTC 33575T). An additional strain of the species is 9-4-1.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" IndexingMethod="Curated" Owner="NLM"><PMID Version="1">27902236</PMID><DateCompleted><Year>2017</Year><Month>08</Month><Day>21</Day></DateCompleted><DateRevised><Year>2019</Year><Month>12</Month><Day>11</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1466-5034</ISSN><JournalIssue CitedMedium="Internet"><Volume>67</Volume><Issue>4</Issue><PubDate><Year>2017</Year><Month>Apr</Month></PubDate></JournalIssue><Title>International journal of systematic and evolutionary microbiology</Title><ISOAbbreviation>Int J Syst Evol Microbiol</ISOAbbreviation></Journal><ArticleTitle>Corticicoccus populi gen. nov., sp. nov., a member of the family Staphylococcaceae, isolated from symptomatic bark of Populus × euramericana canker.</ArticleTitle><Pagination><MedlinePgn>789-794</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1099/ijsem.0.001602</ELocationID><Abstract><AbstractText>Two Gram-stain-positive, aerobic, non-motile, bacterial strains were isolated from symptomatic bark tissue of Populus × euramericana canker. The isolates were able to grow between 10 and 37 °C, at pH 6-10 and with 0-4 % (w/v) NaCl, with optimal growth at 28-30 °C, pH 7.0-8.0 and with 2 % (w/v) NaCl The strains were found to be oxidase and catalase positive. The menaquinone of strain 26D10-3-4T was MK-7 and the peptidoglycan type A3α based on l-Lys-Gly3-?Ala. The polar lipid profiles of strain 26D10-3-4T showed diphosphatidylglycerol, phosphatidylglycerol, two unidentified phospholipids and three unidentified glycolipids, and the major fatty acids found were anteiso-C15 : 0, iso-C15 : 0, iso-C17 : 0 and anteiso-C17 : 0. The DNA G+C content was 38.2 mol%. The two novel isolates shared the highest 16S rRNA gene sequence similarity with Salinicoccus qingdaonensis ZXM223T (95.0 %). Based on phenotypic and genotypic characteristics, these two strains represent a novel species of a new genus of the family Staphylococcaceae; the name Corticicoccus populi gen. nov., sp. nov. is proposed. The type strain of the type species is 26D10-3-4T (=CFCC 12725T=KCTC 33575T). An additional strain of the species is 9-4-1.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Li</LastName><ForeName>Yong</ForeName><Initials>Y</Initials><AffiliationInfo><Affiliation>The Key Laboratory of State Forestry Administration on Forest Protection, Research Institute of Forest Ecology Environment and Protection, Chinese Academy of Forestry, Beijing 100091, PR China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Wang</LastName><ForeName>Sheng-Kun</ForeName><Initials>SK</Initials><AffiliationInfo><Affiliation>Research Institute of Tropical Forestry, Chinese Academy of Forestry, Guangzhou 510520, PR China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Xue</LastName><ForeName>Han</ForeName><Initials>H</Initials><AffiliationInfo><Affiliation>The Key Laboratory of State Forestry Administration on Forest Protection, Research Institute of Forest Ecology Environment and Protection, Chinese Academy of Forestry, Beijing 100091, PR China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Chang</LastName><ForeName>Ju-Pu</ForeName><Initials>JP</Initials><AffiliationInfo><Affiliation>Puyang Academy of Forestry, Puyang 457000, PR China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Guo</LastName><ForeName>Li-Min</ForeName><Initials>LM</Initials><AffiliationInfo><Affiliation>Puyang Academy of Forestry, Puyang 457000, PR China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Yang</LastName><ForeName>Xu-Qi</ForeName><Initials>XQ</Initials><AffiliationInfo><Affiliation>Puyang Academy of Forestry, Puyang 457000, PR China.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2017</Year><Month>05</Month><Day>05</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>Int J Syst Evol Microbiol</MedlineTA><NlmUniqueID>100899600</NlmUniqueID><ISSNLinking>1466-5026</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D004269">DNA, Bacterial</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D005227">Fatty Acids</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D006017">Glycolipids</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D010457">Peptidoglycan</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D010743">Phospholipids</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D012336">RNA, Ribosomal, 16S</NameOfSubstance></Chemical><Chemical><RegistryNumber>11032-49-8</RegistryNumber><NameOfSubstance UI="D024482">Vitamin K 2</NameOfSubstance></Chemical><Chemical><RegistryNumber>8427BML8NY</RegistryNumber><NameOfSubstance UI="C062629">vitamin MK 7</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D015373" MajorTopicYN="N">Bacterial Typing Techniques</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D001482" MajorTopicYN="N">Base Composition</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D002473" MajorTopicYN="N">Cell Wall</DescriptorName><QualifierName UI="Q000737" MajorTopicYN="N">chemistry</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D002681" MajorTopicYN="N">China</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D004269" MajorTopicYN="N">DNA, Bacterial</DescriptorName><QualifierName UI="Q000235" 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MajorTopicYN="Y">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010935" MajorTopicYN="N">Plant Diseases</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D032107" MajorTopicYN="N">Populus</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012336" MajorTopicYN="N">RNA, Ribosomal, 16S</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D017422" MajorTopicYN="N">Sequence Analysis, DNA</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D040141" MajorTopicYN="N">Staphylococcaceae</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="Y">classification</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000302" MajorTopicYN="N">isolation & purification</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D024482" MajorTopicYN="N">Vitamin K 2</DescriptorName><QualifierName UI="Q000031" MajorTopicYN="N">analogs & derivatives</QualifierName><QualifierName UI="Q000737" MajorTopicYN="N">chemistry</QualifierName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="pubmed"><Year>2016</Year><Month>12</Month><Day>3</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2017</Year><Month>8</Month><Day>22</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2016</Year><Month>12</Month><Day>1</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">27902236</ArticleId><ArticleId IdType="doi">10.1099/ijsem.0.001602</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>République populaire de Chine</li></country><region><li>Guangdong</li></region><settlement><li>Jiangmen</li><li>Pékin</li></settlement></list><tree><country name="République populaire de Chine"><noRegion><name sortKey="Li, Yong" sort="Li, Yong" uniqKey="Li Y" first="Yong" last="Li">Yong Li</name></noRegion><name sortKey="Chang, Ju Pu" sort="Chang, Ju Pu" uniqKey="Chang J" first="Ju-Pu" last="Chang">Ju-Pu Chang</name><name sortKey="Guo, Li Min" sort="Guo, Li Min" uniqKey="Guo L" first="Li-Min" last="Guo">Li-Min Guo</name><name sortKey="Wang, Sheng Kun" sort="Wang, Sheng Kun" uniqKey="Wang S" first="Sheng-Kun" last="Wang">Sheng-Kun Wang</name><name sortKey="Xue, Han" sort="Xue, Han" uniqKey="Xue H" first="Han" last="Xue">Han Xue</name><name sortKey="Yang, Xu Qi" sort="Yang, Xu Qi" uniqKey="Yang X" first="Xu-Qi" last="Yang">Xu-Qi Yang</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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|texte= Corticicoccus populi gen. nov., sp. nov., a member of the family Staphylococcaceae, isolated from symptomatic bark of Populus × euramericana canker.
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